EnhancerDB
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  3. rs180957062[chr1:8517420]
Enhancers that have rs180957062[chr1:8517420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180957062[chr1:8517420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8517416 8517431 FOXP1 JASPAR yes 26557026
chr1 8517419 8517426 NFATC2 JASPAR yes 26557027
chr1 8517420 8517428 FOXO3 JASPAR yes 26557028
Genes associated with rs180957062[chr1:8517420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More