EnhancerDB
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  3. rs180972460[chr1:203496216]
Enhancers that have rs180972460[chr1:203496216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs180972460[chr1:203496216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203495709 203496292 ZNF143 GTRD no Epithelial (MCF-7) 21369223
chr1 203495724 203496413 ZNF143 GTRD no Epithelial (MCF-7) 21369224
chr1 203495786 203496241 ZBTB33 GTRD no Brain (SK-N-SH) 21369227
chr1 203495811 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369228
chr1 203495825 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369229
chr1 203495879 203496245 ZNF274 GTRD no Cervix (HeLa-S3) 21369230
chr1 203496213 203496233 RREB1 JASPAR yes 34635753
chr1 203496216 203496236 RREB1 JASPAR yes 34635754
Genes associated with rs180972460[chr1:203496216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More