EnhancerDB
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  3. rs181171690[chr1:223890486]
Enhancers that have rs181171690[chr1:223890486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs181171690[chr1:223890486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223890466 223890486 PPARG JASPAR yes 35669714
chr1 223890477 223890491 RORA JASPAR yes 35669717
chr1 223890478 223890488 RORA JASPAR yes 35669718
Genes associated with rs181171690[chr1:223890486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More