EnhancerDB
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  3. rs181238829[chr17:59418518]
Enhancers that have rs181238829[chr17:59418518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs181238829[chr17:59418518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59418505 59418519 PLAG1 JASPAR yes 55150877
chr17 59418506 59418523 RARA JASPAR yes 55150878
chr17 59418506 59418523 RXRA JASPAR yes 55150879
chr17 59418513 59418521 SP1 TRANSFAC yes 55150881
chr17 59418514 59418519 SP1 TRANSFAC yes 55150882
chr17 59418515 59418520 SP1 TRANSFAC yes 55150883
chr17 59418515 59418524 HIC2 JASPAR yes 55150884
chr17 59418518 59418522 LFA1 TRANSFAC yes 55150885
chr17 59418518 59418533 RFX5 JASPAR yes 55150886
Genes associated with rs181238829[chr17:59418518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More