EnhancerDB
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  3. rs181268645[chr1:204045909]
Enhancers that have rs181268645[chr1:204045909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs181268645[chr1:204045909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204044690 204045942 ZNF143 GTRD no Epithelial (MCF-7) 21370073
chr1 204044690 204045942 ZNF143 GTRD no Epithelial (MCF-7) 107859538
chr1 204045899 204045910 BATF JASPAR yes 34676441
chr1 204045901 204045911 MEOX2 JASPAR yes 34676442
chr1 204045901 204045917 RFX2 JASPAR yes 34676443
chr1 204045901 204045917 RFX3 JASPAR yes 34676444
chr1 204045901 204045917 RFX4 JASPAR yes 34676445
chr1 204045901 204045917 RFX5 JASPAR yes 34676446
chr1 204045902 204045921 RFX2 JASPAR yes 34676447
chr1 204045909 204045921 PKNOX1 JASPAR yes 34676449
chr1 204045909 204045921 PKNOX2 JASPAR yes 34676450
chr1 204045909 204045921 TGIF1 JASPAR yes 34676451
chr1 204045909 204045921 TGIF2 JASPAR yes 34676452
Genes associated with rs181268645[chr1:204045909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More