EnhancerDB
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  3. rs181335288[chr1:227004536]
Enhancers that have rs181335288[chr1:227004536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs181335288[chr1:227004536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227004168 227004764 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21387678
chr1 227004254 227004630 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21387679
chr1 227004534 227004550 RFX3 JASPAR yes 35847639
chr1 227004534 227004550 RFX4 JASPAR yes 35847640
chr1 227004535 227004554 RFX2 JASPAR yes 35847641
Genes associated with rs181335288[chr1:227004536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More