EnhancerDB
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  3. rs181666879[chr1:224387249]
Enhancers that have rs181666879[chr1:224387249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs181666879[chr1:224387249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224387242 224387255 ZBTB18 JASPAR yes 35692874
chr1 224387244 224387254 ID4 JASPAR yes 35692875
chr1 224387244 224387254 TCF3 JASPAR yes 35692876
chr1 224387244 224387254 TCF4 JASPAR yes 35692877
chr1 224387246 224387255 ZEB1 JASPAR yes 35692878
chr1 224387247 224387255 TBX5 JASPAR yes 35692879
Genes associated with rs181666879[chr1:224387249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More