EnhancerDB
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  3. rs181712539[chr6:33554124]
Enhancers that have rs181712539[chr6:33554124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs181712539[chr6:33554124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33554107 33554127 RREB1 JASPAR yes 101157379
chr6 33554110 33554130 RREB1 JASPAR yes 101157380
chr6 33554111 33554131 RREB1 JASPAR yes 101157381
chr6 33554112 33554132 RREB1 JASPAR yes 101157382
chr6 33554114 33554134 RREB1 JASPAR yes 101157383
chr6 33554119 33554131 ZBTB7C JASPAR yes 101157384
Genes associated with rs181712539[chr6:33554124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More