EnhancerDB
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Enhancers that have rs181990904[chr1:55327239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 55327144 55327486 vista1670
VISTA
Transcript factors that have rs181990904[chr1:55327239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55326761 55327325 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805358
chr1 55326986 55327376 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805359
chr1 55326990 55327366 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805360
chr1 55327023 55327323 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805361
chr1 55327048 55327418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805362
chr1 55327049 55327409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805363
chr1 55327072 55327332 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805364
chr1 55327091 55327407 EBF1 UCSC Txn Factor no Conserved 107805365
chr1 55327092 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805366
chr1 55327096 55327432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805367
chr1 55327098 55327374 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805368
chr1 55327105 55327349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805369
chr1 55327112 55327382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805370
chr1 55327124 55327388 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805371
chr1 55327144 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805372
chr1 55327192 55327482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805373
chr1 55327232 55327242 ELK1 JASPAR yes 29002065
chr1 55327232 55327242 ELK3 JASPAR yes 29002066
chr1 55327232 55327242 ERF JASPAR yes 29002067
chr1 55327232 55327242 ERG JASPAR yes 29002068
chr1 55327232 55327242 ETS1 JASPAR yes 29002069
chr1 55327232 55327242 ETV1 JASPAR yes 29002070
chr1 55327232 55327242 ETV3 JASPAR yes 29002071
chr1 55327232 55327242 ETV4 JASPAR yes 29002072
chr1 55327232 55327242 ETV5 JASPAR yes 29002073
chr1 55327232 55327242 FEV JASPAR yes 29002074
chr1 55327232 55327242 FLI1 JASPAR yes 29002075
chr1 55327232 55327242 ELK1 JASPAR yes 118293560
chr1 55327232 55327242 ELK3 JASPAR yes 118293561
chr1 55327232 55327242 ERF JASPAR yes 118293562
chr1 55327232 55327242 ERG JASPAR yes 118293563
chr1 55327232 55327242 ETS1 JASPAR yes 118293564
chr1 55327232 55327242 ETV1 JASPAR yes 118293565
chr1 55327232 55327242 ETV3 JASPAR yes 118293566
chr1 55327232 55327242 ETV4 JASPAR yes 118293567
chr1 55327232 55327242 ETV5 JASPAR yes 118293568
chr1 55327232 55327242 FEV JASPAR yes 118293569
chr1 55327232 55327242 FLI1 JASPAR yes 118293570
chr1 55327232 55327243 SPDEF JASPAR yes 29002076
chr1 55327232 55327243 SPDEF JASPAR yes 118293571
chr1 55327233 55327242 ELK4 JASPAR yes 29002077
chr1 55327233 55327242 ELK4 JASPAR yes 118293572
Genes associated with rs181990904[chr1:55327239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More