EnhancerDB
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  3. rs1820246[chr16:84759234]
Enhancers that have rs1820246[chr16:84759234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 84750185 84777075 enh4172
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1820246[chr16:84759234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 84759229 84759243 RXRB JASPAR yes 11993438
chr16 84759229 84759243 RXRG JASPAR yes 11993439
chr16 84759229 84759244 NR2C2 JASPAR yes 11993440
chr16 84759232 84759245 NR2F1 JASPAR yes 11993441
Genes associated with rs1820246[chr16:84759234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More