EnhancerDB
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  3. rs182058840[chr12:96847309]
Enhancers that have rs182058840[chr12:96847309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182058840[chr12:96847309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96846992 96847449 ZNF143 GTRD no Epithelial (MCF-7) 21567785
chr12 96847031 96847385 TCF7L2 GTRD no Colon (HCT116) 21567786
chr12 96847127 96847470 ZNF143 GTRD no Epithelial (MCF-7) 21567787
chr12 96847154 96847417 TCF7L2 GTRD no Colon (HCT116) 21567788
chr12 96847292 96847309 ESR1 JASPAR yes 123073385
chr12 96847307 96847325 E2F3 JASPAR yes 123073386
Genes associated with rs182058840[chr12:96847309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More