EnhancerDB
  1. Home
  2. SNP
  3. rs182149090[chr1:203627914]
Enhancers that have rs182149090[chr1:203627914]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182149090[chr1:203627914]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 21369748
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 107859243
chr1 203627905 203627922 RARA JASPAR yes 34652258
chr1 203627905 203627922 RXRA JASPAR yes 34652259
chr1 203627912 203627922 RORA JASPAR yes 34652261
chr1 203627913 203627924 ESRRA JASPAR yes 34652262
chr1 203627913 203627924 ESRRB JASPAR yes 34652263
chr1 203627913 203627926 NR2F1 JASPAR yes 34652264
Genes associated with rs182149090[chr1:203627914], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More