EnhancerDB
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  3. rs182297709[chr16:87494454]
Enhancers that have rs182297709[chr16:87494454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs182297709[chr16:87494454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87494448 87494459 CDX2 JASPAR yes 12218096
chr16 87494449 87494460 HOXA10 JASPAR yes 12218097
chr16 87494449 87494460 HOXC11 JASPAR yes 12218098
chr16 87494449 87494460 HOXC12 JASPAR yes 12218099
chr16 87494449 87494460 HOXD12 JASPAR yes 12218100
chr16 87494450 87494459 CDX1 JASPAR yes 12218101
chr16 87494450 87494460 HOXC10 JASPAR yes 12218102
chr16 87494450 87494460 HOXD11 JASPAR yes 12218103
Genes associated with rs182297709[chr16:87494454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More