EnhancerDB
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  3. rs182459998[chr2:38933835]
Enhancers that have rs182459998[chr2:38933835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs182459998[chr2:38933835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38933821 38933840 RFX2 JASPAR yes 73167811
chr2 38933823 38933838 RFX5 JASPAR yes 73167812
chr2 38933824 38933840 SOX4 JASPAR yes 73167813
chr2 38933829 38933839 MYF6 JASPAR yes 73167814
Genes associated with rs182459998[chr2:38933835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More