EnhancerDB
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  3. rs182517540[chr1:225887453]
Enhancers that have rs182517540[chr1:225887453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs182517540[chr1:225887453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225886742 225887469 ZNF143 GTRD no Epithelial (MCF-7) 21385484
chr1 225886833 225887480 ZNF274 GTRD no Liver (HepG2) 21385488
chr1 225887448 225887453 TBP TRANSFAC yes 35763426
chr1 225887450 225887465 RUNX2 JASPAR yes 35763427
chr1 225887451 225887460 RUNX2 JASPAR yes 35763428
chr1 225887451 225887461 RUNX3 JASPAR yes 35763429
chr1 225887451 225887462 RUNX1 JASPAR yes 35763430
Genes associated with rs182517540[chr1:225887453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More