EnhancerDB
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  3. rs182657434[chr17:2860957]
Enhancers that have rs182657434[chr17:2860957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs182657434[chr17:2860957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2860945 2860958 NFKB1 JASPAR yes 52789755
chr17 2860945 2860958 NFKB2 JASPAR yes 52789756
chr17 2860946 2860957 NFKB1 JASPAR yes 52789757
chr17 2860947 2860957 NFKB1 JASPAR yes 52789759
chr17 2860947 2860957 RELA JASPAR yes 52789760
chr17 2860947 2860958 NFKB1 JASPAR yes 52789761
chr17 2860948 2860963 TFAP2C JASPAR yes 52789762
chr17 2860951 2860962 TFAP2A JASPAR yes 52789763
chr17 2860951 2860962 TFAP2B JASPAR yes 52789764
chr17 2860951 2860962 TFAP2C JASPAR yes 52789765
chr17 2860952 2860961 TFAP2A JASPAR yes 52789766
Genes associated with rs182657434[chr17:2860957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More