EnhancerDB
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  3. rs182737988[chr17:55620139]
Enhancers that have rs182737988[chr17:55620139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs182737988[chr17:55620139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55620125 55620145 ESR1 JASPAR yes 16339
chr17 55620125 55620145 ESR1 JASPAR yes 54966917
chr17 55620134 55620147 SMAD2 JASPAR yes 16342
chr17 55620134 55620147 SMAD2 JASPAR yes 54966920
chr17 55620139 55620151 HES5 JASPAR yes 16343
chr17 55620139 55620151 HES7 JASPAR yes 16344
chr17 55620139 55620151 HES5 JASPAR yes 54966921
chr17 55620139 55620151 HES7 JASPAR yes 54966922
Genes associated with rs182737988[chr17:55620139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More