EnhancerDB
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  3. rs183042226[chr5:90612155]
Enhancers that have rs183042226[chr5:90612155]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183042226[chr5:90612155]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90612140 90612155 LEF1 JASPAR yes 64192197
chr5 90612141 90612155 TCF7L2 JASPAR yes 64192198
chr5 90612143 90612157 IRF7 JASPAR yes 64192199
chr5 90612154 90612158 ESR1 TRANSFAC yes 64192200
chr5 90612154 90612164 MEOX2 JASPAR yes 64192201
chr5 90612154 90612164 MNX1 JASPAR yes 64192202
chr5 90612154 90612165 HOXA10 JASPAR yes 64192203
chr5 90612154 90612165 HOXC11 JASPAR yes 64192204
chr5 90612155 90612163 NKX6-1 JASPAR yes 64192205
chr5 90612155 90612165 HOXC10 JASPAR yes 64192206
Genes associated with rs183042226[chr5:90612155], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More