EnhancerDB
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  3. rs183154996[chr17:56079447]
Enhancers that have rs183154996[chr17:56079447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs183154996[chr17:56079447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56079431 56079452 IRF1 JASPAR yes 55005920
chr17 56079437 56079458 IRF1 JASPAR yes 55005925
chr17 56079439 56079454 PRDM1 JASPAR yes 55005926
Genes associated with rs183154996[chr17:56079447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More