EnhancerDB
  1. Home
  2. SNP
  3. rs183202158[chr19:13966104]
Enhancers that have rs183202158[chr19:13966104]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183202158[chr19:13966104]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13964390 13966469 AR GTRD no Prostate (PC-3) 21852771
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965445 13966199 TCF7L2 GTRD no Colon (HCT116) 21852780
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13965470 13966728 ZNF143 GTRD no Epithelial (MCF-7) 21852783
chr19 13966087 13966105 RARA JASPAR yes 112539122
Genes associated with rs183202158[chr19:13966104], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More