EnhancerDB
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  3. rs183228929[chr2:25517978]
Enhancers that have rs183228929[chr2:25517978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs183228929[chr2:25517978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431384
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431385
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431386
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431387
chr2 25517956 25518496 GABPA UCSC Txn Factor no Conserved 108431388
chr2 25517967 25517981 GLIS3 JASPAR yes 72463070
chr2 25517976 25517987 ESRRB JASPAR yes 72463071
chr2 25517977 25517992 HNF4G JASPAR yes 72463072
chr2 25517978 25517993 HNF4A JASPAR yes 72463073
Genes associated with rs183228929[chr2:25517978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More