EnhancerDB
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  3. rs183500969[chr17:27965201]
Enhancers that have rs183500969[chr17:27965201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183500969[chr17:27965201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27965188 27965202 JUN JASPAR yes 53744102
chr17 27965198 27965218 RREB1 JASPAR yes 53744103
chr17 27965199 27965211 FOXI1 JASPAR yes 53744104
chr17 27965199 27965219 RREB1 JASPAR yes 53744105
chr17 27965201 27965221 RREB1 JASPAR yes 53744106
Genes associated with rs183500969[chr17:27965201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More