EnhancerDB
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  3. rs183565186[chr1:178624402]
Enhancers that have rs183565186[chr1:178624402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs183565186[chr1:178624402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178624392 178624402 ALX3 JASPAR yes 33434228
chr1 178624392 178624402 EN2 JASPAR yes 33434229
chr1 178624392 178624402 ESX1 JASPAR yes 33434230
chr1 178624392 178624402 GBX2 JASPAR yes 33434231
chr1 178624392 178624402 GSX1 JASPAR yes 33434232
chr1 178624392 178624402 GSX2 JASPAR yes 33434233
chr1 178624392 178624402 LBX2 JASPAR yes 33434234
chr1 178624392 178624402 LHX2 JASPAR yes 33434235
chr1 178624399 178624403 LFA1 TRANSFAC yes 33434249
Genes associated with rs183565186[chr1:178624402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More