EnhancerDB
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  3. rs183609848[chr17:62171630]
Enhancers that have rs183609848[chr17:62171630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs183609848[chr17:62171630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 21778634
chr17 62169081 62172052 ZNF143 GTRD no Epithelial (MCF-7) 108282259
chr17 62169667 62172017 ZNF143 GTRD no Epithelial (MCF-7) 21778636
chr17 62169667 62172017 ZNF143 GTRD no Epithelial (MCF-7) 108282263
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282264
chr17 62169690 62174645 ZNF274 GTRD no Bone Marrow (K562) 108282265
chr17 62169718 62174465 ZNF274 GTRD no Bone Marrow (K562) 108282267
chr17 62171628 62171632 NFE TRANSFAC yes 55276801
chr17 62171629 62171634 GATA2 JASPAR yes 55276802
Genes associated with rs183609848[chr17:62171630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More