EnhancerDB
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  3. rs183855380[chr16:85340975]
Enhancers that have rs183855380[chr16:85340975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs183855380[chr16:85340975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85340313 85341098 TCF7L2 GTRD no Colon (HCT116) 21723058
chr16 85340495 85340986 ZNF143 GTRD no Epithelial (MCF-7) 21723059
chr16 85340624 85341016 TCF7L2 GTRD no Colon (HCT116) 21723061
chr16 85340704 85340982 ZNF274 GTRD no Bone Marrow (K562) 21723062
chr16 85340852 85341465 ZNF274 GTRD no Liver (HepG2) 21723064
chr16 85340925 85341389 ZNF274 GTRD no Bone Marrow (K562) 21723065
chr16 85340934 85341442 ZNF274 GTRD no Liver (HepG2) 21723066
chr16 85340936 85341489 ZNF143 GTRD no Epithelial (MCF-7) 21723067
chr16 85340967 85340975 TBX5 JASPAR yes 12045038
chr16 85340967 85340976 ZEB1 JASPAR yes 12045039
chr16 85340968 85340978 ID4 JASPAR yes 12045040
chr16 85340968 85340978 NHLH1 JASPAR yes 12045041
chr16 85340968 85340978 TCF3 JASPAR yes 12045042
chr16 85340968 85340978 TCF4 JASPAR yes 12045043
chr16 85340969 85340978 SNAI2 JASPAR yes 12045044
chr16 85340970 85340975 USF2 TRANSFAC yes 12045045
Genes associated with rs183855380[chr16:85340975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More