EnhancerDB
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Enhancers that have rs184013580[chr17:73423960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73418765 73428832 enh17376
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs184013580[chr17:73423960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73423132 73424406 TCF7L2 GTRD no Colon (HCT116) 21787951
chr17 73423161 73424234 ZNF143 GTRD no Epithelial (MCF-7) 21787952
chr17 73423183 73424179 TCF7L2 GTRD no Colon (HCT116) 21787953
chr17 73423329 73424148 ZNF143 GTRD no Epithelial (MCF-7) 21787956
chr17 73423628 73424413 TCF7L2 GTRD no Colon (HCT116) 21787957
chr17 73423668 73424338 TCF7L2 GTRD no Colon (HCT116) 21787958
chr17 73423793 73424350 TCF7L2 GTRD no Colon (HCT116) 21787959
chr17 73423956 73423969 SMAD2 JASPAR yes 55956244
chr17 73423959 73423967 MEIS2 JASPAR yes 55956245
chr17 73423959 73423967 MEIS3 JASPAR yes 55956246
chr17 73423960 73423964 NFE TRANSFAC yes 55956247
Genes associated with rs184013580[chr17:73423960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More