EnhancerDB
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  3. rs184056954[chr16:87900600]
Enhancers that have rs184056954[chr16:87900600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs184056954[chr16:87900600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87900084 87901006 TCF7L2 GTRD no Colon (HCT116) 21735365
chr16 87900212 87900681 ZNF274 GTRD no Liver (HepG2) 21735366
chr16 87900345 87900705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735367
chr16 87900371 87900621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735368
chr16 87900376 87900640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21735369
chr16 87900380 87900640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735370
chr16 87900396 87900620 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735371
chr16 87900397 87900627 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735372
chr16 87900401 87900631 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735373
chr16 87900595 87900600 SP1 TRANSFAC yes 12249616
Genes associated with rs184056954[chr16:87900600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More