EnhancerDB
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  3. rs184094052[chr1:1611822]
Enhancers that have rs184094052[chr1:1611822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
chr1 1611804 1612115 vista43
VISTA
Transcript factors that have rs184094052[chr1:1611822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1611661 1612110 TCF7L2 GTRD no Colon (HCT116) 107801795
chr1 1611803 1611822 REST JASPAR yes 26198127
chr1 1611803 1611822 REST JASPAR yes 118215087
chr1 1611812 1611824 NHLH1 JASPAR yes 26198128
chr1 1611812 1611824 NHLH1 JASPAR yes 118215088
chr1 1611813 1611823 NHLH1 JASPAR yes 26198129
chr1 1611813 1611823 NHLH1 JASPAR yes 118215089
Genes associated with rs184094052[chr1:1611822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More