EnhancerDB
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  3. rs184366520[chr1:227017498]
Enhancers that have rs184366520[chr1:227017498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs184366520[chr1:227017498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227016879 227017604 ZNF143 GTRD no Epithelial (MCF-7) 21387776
chr1 227016962 227017556 ZNF143 GTRD no Epithelial (MCF-7) 21387778
chr1 227017481 227017502 IRF1 JASPAR yes 35849482
chr1 227017483 227017504 IRF1 JASPAR yes 35849483
chr1 227017487 227017508 IRF1 JASPAR yes 35849484
chr1 227017488 227017503 FOXP1 JASPAR yes 35849485
chr1 227017488 227017509 IRF1 JASPAR yes 35849486
chr1 227017489 227017510 IRF1 JASPAR yes 35849487
chr1 227017490 227017505 FOXP1 JASPAR yes 35849488
chr1 227017492 227017507 FOXP1 JASPAR yes 35849489
chr1 227017493 227017508 FOXP1 JASPAR yes 35849490
chr1 227017494 227017509 FOXP1 JASPAR yes 35849491
chr1 227017495 227017510 FOXP1 JASPAR yes 35849492
chr1 227017496 227017511 FOXP1 JASPAR yes 35849493
chr1 227017497 227017512 FOXP1 JASPAR yes 35849494
Genes associated with rs184366520[chr1:227017498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More