EnhancerDB
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  3. rs184575954[chr17:55612746]
Enhancers that have rs184575954[chr17:55612746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs184575954[chr17:55612746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55612744 55612753 PITX3 JASPAR yes 54965821
chr17 55612744 55612754 GSC2 JASPAR yes 54965822
chr17 55612744 55612754 GSC JASPAR yes 54965823
chr17 55612745 55612753 OTX1 JASPAR yes 54965824
Genes associated with rs184575954[chr17:55612746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More