EnhancerDB
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  3. rs184908871[chr1:16507200]
Enhancers that have rs184908871[chr1:16507200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs184908871[chr1:16507200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16507182 16507203 IRF1 JASPAR yes 27032079
chr1 16507186 16507200 IRF7 JASPAR yes 27032081
chr1 16507194 16507204 ALX3 JASPAR yes 27032083
chr1 16507194 16507204 GSX1 JASPAR yes 27032084
chr1 16507194 16507204 GSX2 JASPAR yes 27032085
chr1 16507194 16507204 LHX6 JASPAR yes 27032086
chr1 16507194 16507204 MIXL1 JASPAR yes 27032087
chr1 16507194 16507204 MNX1 JASPAR yes 27032088
chr1 16507194 16507204 NOTO JASPAR yes 27032089
chr1 16507194 16507204 POU6F1 JASPAR yes 27032090
chr1 16507194 16507204 RAX JASPAR yes 27032091
chr1 16507195 16507203 ISX JASPAR yes 27032092
chr1 16507195 16507203 LMX1A JASPAR yes 27032093
chr1 16507195 16507203 LMX1B JASPAR yes 27032094
chr1 16507195 16507203 NKX6-1 JASPAR yes 27032095
chr1 16507195 16507203 NKX6-2 JASPAR yes 27032096
chr1 16507195 16507203 PRRX1 JASPAR yes 27032097
chr1 16507195 16507203 RAX2 JASPAR yes 27032098
chr1 16507195 16507203 SHOX JASPAR yes 27032099
chr1 16507195 16507203 UNCX JASPAR yes 27032100
chr1 16507195 16507203 VAX1 JASPAR yes 27032101
chr1 16507195 16507208 DUXA JASPAR yes 27032102
chr1 16507196 16507206 PAX3 JASPAR yes 27032103
chr1 16507196 16507206 PAX7 JASPAR yes 27032104
chr1 16507196 16507207 DUX4 JASPAR yes 27032105
chr1 16507196 16507207 PHOX2A JASPAR yes 27032106
chr1 16507196 16507207 PROP1 JASPAR yes 27032107
chr1 16507199 16507212 POU3F3 JASPAR yes 27032108
chr1 16507199 16507213 POU1F1 JASPAR yes 27032109
chr1 16507200 16507212 POU3F1 JASPAR yes 27032110
chr1 16507200 16507213 POU3F3 JASPAR yes 27032111
Genes associated with rs184908871[chr1:16507200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More