EnhancerDB
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  3. rs185288375[chr1:225641398]
Enhancers that have rs185288375[chr1:225641398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185288375[chr1:225641398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225641393 225641406 DUXA JASPAR yes 35742217
chr1 225641394 225641405 DUX4 JASPAR yes 35742218
chr1 225641394 225641405 PHOX2A JASPAR yes 35742219
chr1 225641394 225641405 PROP1 JASPAR yes 35742220
chr1 225641397 225641407 ALX3 JASPAR yes 35742221
chr1 225641397 225641407 HESX1 JASPAR yes 35742222
Genes associated with rs185288375[chr1:225641398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More