EnhancerDB
  1. Home
  2. SNP
  3. rs1853478[chr17:62688881]
Enhancers that have rs1853478[chr17:62688881]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1853478[chr17:62688881]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62687737 62689112 TCF7L2 GTRD no Colon (HCT116) 21778956
chr17 62687737 62691399 ZNF143 GTRD no Epithelial (MCF-7) 21778957
chr17 62687749 62691357 TCF7L2 GTRD no Colon (HCT116) 21778958
chr17 62687783 62691374 ZNF143 GTRD no Epithelial (MCF-7) 21778959
chr17 62687797 62691593 ZNF143 GTRD no Epithelial (MCF-7) 21778960
chr17 62687810 62695569 ZNF143 GTRD no Epithelial (MCF-7) 21778961
chr17 62687850 62689240 ZNF143 GTRD no Epithelial (MCF-7) 21778962
chr17 62687873 62694535 ZNF143 GTRD no Epithelial (MCF-7) 21778963
chr17 62687878 62695454 ZNF143 GTRD no Epithelial (MCF-7) 21778964
chr17 62687993 62695445 ZNF143 GTRD no Epithelial (MCF-7) 21778965
chr17 62688338 62689151 TCF7L2 GTRD no Colon (HCT116) 21778971
chr17 62688394 62691502 TCF7L2 GTRD no Colon (HCT116) 21778973
chr17 62688432 62689798 ZNF143 GTRD no Epithelial (MCF-7) 21778974
chr17 62688476 62690874 TCF7L2 GTRD no Colon (HCT116) 21778975
chr17 62688562 62689354 TCF7L2 GTRD no Colon (HCT116) 21778976
chr17 62688634 62689485 ZNF143 GTRD no Epithelial (MCF-7) 21778977
chr17 62688719 62689269 ZNF274 GTRD no Cervix (HeLa-S3) 21778978
chr17 62688877 62688898 ZNF263 JASPAR yes 55312319
Genes associated with rs1853478[chr17:62688881], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More