EnhancerDB
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  3. rs1857968[chr1:209586137]
Enhancers that have rs1857968[chr1:209586137]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1857968[chr1:209586137]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209584773 209586664 AR GTRD no Prostate (PC-3) 21375296
chr1 209584773 209586664 AR GTRD no Prostate (PC-3) 107865744
chr1 209585531 209586726 ZBTB33 GTRD no Brain (SK-N-SH) 107865747
chr1 209585533 209586691 ZBTB33 GTRD no Brain (SK-N-SH) 107865748
chr1 209585538 209588619 ZBTB33 GTRD no Brain (SK-N-SH) 107865749
chr1 209585642 209586174 TCF7L2 GTRD no Colon (HCT116) 21375303
chr1 209585642 209586174 TCF7L2 GTRD no Colon (HCT116) 107865757
chr1 209585685 209586140 TCF7L2 GTRD no Colon (HCT116) 21375306
chr1 209585685 209586140 TCF7L2 GTRD no Colon (HCT116) 107865760
chr1 209585705 209586232 ZBTB33 GTRD no Lung (A549) 21375307
chr1 209585705 209586232 ZBTB33 GTRD no Lung (A549) 107865761
chr1 209585764 209586177 ZBTB33 GTRD no Lung (A549) 21375310
chr1 209585779 209586182 ZBTB33 GTRD no Lung (A549) 21375311
chr1 209586132 209586139 SPIB JASPAR yes 34973356
chr1 209586132 209586142 ETV6 JASPAR yes 34973357
chr1 209586132 209586143 FLI1 JASPAR yes 34973358
chr1 209586133 209586141 FEV JASPAR yes 34973359
Genes associated with rs1857968[chr1:209586137], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More