EnhancerDB
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  3. rs185874899[chr1:226995104]
Enhancers that have rs185874899[chr1:226995104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs185874899[chr1:226995104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226994459 226995504 TCF7L2 GTRD no Colon (HCT116) 21387586
chr1 226994648 226995366 TCF7L2 GTRD no Colon (HCT116) 21387587
chr1 226994747 226996532 ZNF274 GTRD no Blood (GM12878) 21387588
chr1 226994862 226995264 ZNF143 GTRD no Epithelial (MCF-7) 21387589
chr1 226994921 226996503 ZNF274 GTRD no Blood (GM12878) 21387590
chr1 226994973 226995348 ZNF274 GTRD no Bone Marrow (K562) 21387591
chr1 226994998 226996358 ZNF274 GTRD no Blood (GM12878) 21387592
chr1 226995029 226996461 ZNF274 GTRD no Blood (GM12878) 21387593
chr1 226995034 226996453 ZNF274 GTRD no Blood (GM12878) 21387594
chr1 226995055 226996391 ZNF274 GTRD no Blood (GM12878) 21387595
chr1 226995074 226996428 ZNF274 GTRD no Blood (GM12878) 21387596
chr1 226995075 226996390 ZNF274 GTRD no Blood (GM12878) 21387597
chr1 226995096 226995115 PAX5 JASPAR yes 35846215
Genes associated with rs185874899[chr1:226995104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More