EnhancerDB
  1. Home
  2. SNP
  3. rs186079744[chr19:13275988]
Enhancers that have rs186079744[chr19:13275988]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186079744[chr19:13275988]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13274698 13276285 ZNF274 GTRD no Blood (GM12878) 21851031
chr19 13274698 13276285 ZNF274 GTRD no Blood (GM12878) 108389400
chr19 13274698 13276285 ZNF274 GTRD no Blood (GM12878) 108389401
chr19 13275381 13276216 ZNF143 GTRD no Epithelial (MCF-7) 21851087
chr19 13275381 13276216 ZNF143 GTRD no Epithelial (MCF-7) 108389489
chr19 13275695 13276331 TCF7L2 GTRD no Colon (HCT116) 21851094
chr19 13275695 13276331 TCF7L2 GTRD no Colon (HCT116) 108389508
chr19 13275829 13276690 TCF7L2 GTRD no Colon (HCT116) 21851095
chr19 13275889 13276690 ZNF274 GTRD no Blood (GM12878) 21851096
chr19 13275983 13276499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851097
Genes associated with rs186079744[chr19:13275988], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More