EnhancerDB
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  3. rs1862005[chr11:65863402]
Enhancers that have rs1862005[chr11:65863402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65862700 65887735 enh1831
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1862005[chr11:65863402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65849754 65863652 ZNF274 GTRD no Blood (GM12878) 21496198
chr11 65849754 65863652 ZNF274 GTRD no Blood (GM12878) 21496199
chr11 65849754 65863652 ZNF274 GTRD no Blood (GM12878) 107982195
chr11 65863394 65863415 IRF1 JASPAR yes 39349114
chr11 65863397 65863411 SPI1 JASPAR yes 39349115
chr11 65863397 65863418 IRF1 JASPAR yes 39349116
chr11 65863400 65863415 FOXP1 JASPAR yes 39349117
chr11 65863402 65863417 FOXP1 JASPAR yes 39349118
Genes associated with rs1862005[chr11:65863402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More