EnhancerDB
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  3. rs1862399[chr5:148819249]
Enhancers that have rs1862399[chr5:148819249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1862399[chr5:148819249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148819237 148819251 ONECUT3 JASPAR yes 66814047
chr5 148819239 148819250 PROP1 JASPAR yes 66814048
chr5 148819241 148819255 POU4F1 JASPAR yes 66814049
chr5 148819242 148819255 DUXA JASPAR yes 66814050
chr5 148819243 148819254 DUX4 JASPAR yes 66814051
chr5 148819243 148819254 PHOX2A JASPAR yes 66814052
chr5 148819243 148819254 PROP1 JASPAR yes 66814053
chr5 148819243 148819259 POU4F2 JASPAR yes 66814054
chr5 148819243 148819259 POU4F3 JASPAR yes 66814055
chr5 148819244 148819254 PAX3 JASPAR yes 66814056
chr5 148819244 148819254 PAX7 JASPAR yes 66814057
chr5 148819245 148819259 POU4F1 JASPAR yes 66814058
chr5 148819245 148819260 HNF1A JASPAR yes 66814059
chr5 148819246 148819256 GSX1 JASPAR yes 66814060
chr5 148819246 148819256 GSX2 JASPAR yes 66814061
chr5 148819246 148819256 LHX2 JASPAR yes 66814062
chr5 148819246 148819256 LHX6 JASPAR yes 66814063
chr5 148819246 148819256 MNX1 JASPAR yes 66814064
chr5 148819246 148819256 NOTO JASPAR yes 66814065
chr5 148819246 148819256 POU6F1 JASPAR yes 66814066
chr5 148819246 148819256 RAX JASPAR yes 66814067
chr5 148819246 148819261 HNF1A JASPAR yes 66814068
chr5 148819247 148819255 ISX JASPAR yes 66814069
chr5 148819247 148819255 LMX1A JASPAR yes 66814070
chr5 148819247 148819255 LMX1B JASPAR yes 66814071
chr5 148819247 148819255 NKX6-1 JASPAR yes 66814072
chr5 148819247 148819255 NKX6-2 JASPAR yes 66814073
chr5 148819247 148819255 PRRX1 JASPAR yes 66814074
chr5 148819247 148819255 RAX2 JASPAR yes 66814075
chr5 148819247 148819255 SHOX JASPAR yes 66814076
chr5 148819247 148819255 UNCX JASPAR yes 66814077
chr5 148819247 148819255 VAX1 JASPAR yes 66814078
chr5 148819247 148819258 PHOX2A JASPAR yes 66814079
chr5 148819247 148819258 PROP1 JASPAR yes 66814080
chr5 148819247 148819261 POU4F1 JASPAR yes 66814081
chr5 148819247 148819263 POU4F2 JASPAR yes 66814082
chr5 148819247 148819263 POU4F3 JASPAR yes 66814083
chr5 148819248 148819258 PAX3 JASPAR yes 66814084
chr5 148819248 148819258 PAX7 JASPAR yes 66814085
chr5 148819248 148819259 PHOX2A JASPAR yes 66814086
chr5 148819248 148819259 PROP1 JASPAR yes 66814087
chr5 148819249 148819263 POU4F1 JASPAR yes 66814088
chr5 148819249 148819264 HNF1A JASPAR yes 66814089
Genes associated with rs1862399[chr5:148819249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More