EnhancerDB
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  3. rs186259511[chr6:25027575]
Enhancers that have rs186259511[chr6:25027575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr6 25027478 25027700 vista51364
VISTA
Transcript factors that have rs186259511[chr6:25027575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25027371 25027795 CTCF UCSC Txn Factor no Conserved 108539108
chr6 25027446 25027710 RAD21 UCSC Txn Factor no Conserved 108539109
chr6 25027447 25027717 SMC3 UCSC Txn Factor no Conserved 108539110
chr6 25027563 25027578 RFX5 JASPAR yes 70336190
chr6 25027563 25027578 RFX5 JASPAR yes 100815680
chr6 25027566 25027580 EBF1 JASPAR yes 70336191
chr6 25027566 25027580 EBF1 JASPAR yes 100815681
chr6 25027567 25027586 CTCF JASPAR yes 70336192
chr6 25027567 25027586 CTCF JASPAR yes 100815682
chr6 25027568 25027579 EBF1 JASPAR yes 70336193
chr6 25027568 25027579 EBF1 JASPAR yes 100815683
chr6 25027568 25027583 ZIC3 JASPAR yes 70336194
chr6 25027568 25027583 ZIC3 JASPAR yes 100815684
chr6 25027573 25027583 SP1 JASPAR yes 70336195
chr6 25027573 25027583 SP1 JASPAR yes 100815685
chr6 25027573 25027594 ZNF263 JASPAR yes 70336196
chr6 25027573 25027594 ZNF263 JASPAR yes 100815686
Genes associated with rs186259511[chr6:25027575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More