EnhancerDB
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  3. rs1862920[chr18:53665398]
Enhancers that have rs1862920[chr18:53665398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 53662065 53669555 enh17726
Brain (SK-N-SH) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs1862920[chr18:53665398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 53665393 53665406 NR2F1 JASPAR yes 110812571
chr18 53665396 53665407 CDX2 JASPAR yes 110812572
chr18 53665396 53665411 ESR2 JASPAR yes 110812573
chr18 53665397 53665401 ESR1 TRANSFAC yes 110812574
chr18 53665397 53665408 HOXA10 JASPAR yes 110812575
chr18 53665397 53665408 HOXC11 JASPAR yes 110812576
chr18 53665397 53665408 HOXC12 JASPAR yes 110812577
chr18 53665397 53665408 HOXD12 JASPAR yes 110812578
chr18 53665398 53665407 CDX1 JASPAR yes 110812579
chr18 53665398 53665408 HOXC10 JASPAR yes 110812580
chr18 53665398 53665408 HOXD11 JASPAR yes 110812581
Genes associated with rs1862920[chr18:53665398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More