EnhancerDB
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  3. rs186379662[chr1:27910539]
Enhancers that have rs186379662[chr1:27910539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs186379662[chr1:27910539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27910533 27910545 NHLH1 JASPAR yes 27712265
chr1 27910534 27910543 SNAI2 JASPAR yes 27712266
chr1 27910534 27910544 ID4 JASPAR yes 27712267
chr1 27910534 27910544 NHLH1 JASPAR yes 27712268
chr1 27910534 27910544 TCF3 JASPAR yes 27712269
chr1 27910534 27910544 TCF4 JASPAR yes 27712270
Genes associated with rs186379662[chr1:27910539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More