EnhancerDB
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  3. rs186456391[chr17:40399849]
Enhancers that have rs186456391[chr17:40399849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs186456391[chr17:40399849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40399839 40399854 SCRT1 JASPAR yes 54289161
chr17 40399840 40399850 FIGLA JASPAR yes 54289162
chr17 40399840 40399850 ID4 JASPAR yes 54289163
chr17 40399840 40399850 TCF3 JASPAR yes 54289164
chr17 40399840 40399850 TCF4 JASPAR yes 54289165
chr17 40399841 40399850 SNAI2 JASPAR yes 54289166
chr17 40399846 40399862 RFX2 JASPAR yes 54289168
chr17 40399846 40399862 RFX3 JASPAR yes 54289169
chr17 40399846 40399862 RFX4 JASPAR yes 54289170
Genes associated with rs186456391[chr17:40399849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More