EnhancerDB
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  3. rs186535907[chr19:13955593]
Enhancers that have rs186535907[chr19:13955593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186535907[chr19:13955593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13954960 13955635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852218
chr19 13954960 13955635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390163
chr19 13955336 13955600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852241
chr19 13955336 13955600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390186
chr19 13955437 13955793 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852242
chr19 13955437 13955793 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390187
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 21852243
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 108390188
chr19 13955468 13956409 ZNF143 GTRD no Epithelial (MCF-7) 21852244
chr19 13955468 13956409 ZNF143 GTRD no Epithelial (MCF-7) 108390189
chr19 13955478 13955768 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852245
chr19 13955478 13955768 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390190
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 21852246
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 108390191
chr19 13955492 13956173 ZNF143 GTRD no Epithelial (MCF-7) 21852247
chr19 13955492 13956173 ZNF143 GTRD no Epithelial (MCF-7) 108390192
chr19 13955496 13955766 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852248
chr19 13955496 13955766 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390193
chr19 13955498 13955788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852249
chr19 13955498 13955788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390194
chr19 13955534 13956387 ZNF143 GTRD no Epithelial (MCF-7) 21852250
chr19 13955534 13956387 ZNF143 GTRD no Epithelial (MCF-7) 108390195
chr19 13955540 13956170 TCF7L2 GTRD no Colon (HCT116) 21852251
chr19 13955540 13956170 TCF7L2 GTRD no Colon (HCT116) 108390196
chr19 13955562 13956783 ZNF143 GTRD no Epithelial (MCF-7) 21852252
chr19 13955562 13956783 ZNF143 GTRD no Epithelial (MCF-7) 108390197
chr19 13955586 13955600 BATF3 JASPAR yes 70810409
chr19 13955586 13955600 BATF3 JASPAR yes 112537407
chr19 13955589 13956352 ZNF143 GTRD no Epithelial (MCF-7) 21852253
chr19 13955589 13956352 ZNF143 GTRD no Epithelial (MCF-7) 108390198
chr19 13955589 13956537 TCF7L2 GTRD no Colon (HCT116) 21852254
chr19 13955589 13956537 TCF7L2 GTRD no Colon (HCT116) 108390199
chr19 13955593 13956452 TCF7L2 GTRD no Colon (HCT116) 21852255
Genes associated with rs186535907[chr19:13955593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More