EnhancerDB
  1. Home
  2. SNP
  3. rs186550504[chr1:201427959]
Enhancers that have rs186550504[chr1:201427959]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186550504[chr1:201427959]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201427748 201428055 ZNF143 GTRD no Epithelial (MCF-7) 21364078
chr1 201427850 201428889 ZNF143 GTRD no Epithelial (MCF-7) 21364079
chr1 201427927 201428338 ZNF274 GTRD no Cervix (HeLa-S3) 21364080
chr1 201427952 201427962 SP1 JASPAR yes 34495958
chr1 201427952 201427973 ZNF263 JASPAR yes 34495959
chr1 201427954 201427959 SP1 TRANSFAC yes 34495960
chr1 201427954 201427966 HINFP JASPAR yes 34495961
chr1 201427959 201427976 ESR1 JASPAR yes 34495962
Genes associated with rs186550504[chr1:201427959], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More