EnhancerDB
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  3. rs186553486[chr1:224382389]
Enhancers that have rs186553486[chr1:224382389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs186553486[chr1:224382389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224382377 224382389 HLF JASPAR yes 35692229
chr1 224382378 224382389 CEBPB JASPAR yes 35692230
chr1 224382389 224382393 NFE TRANSFAC yes 35692231
Genes associated with rs186553486[chr1:224382389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More