EnhancerDB
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  3. rs186555387[chr12:125028197]
Enhancers that have rs186555387[chr12:125028197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186555387[chr12:125028197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125027983 125028608 ZNF274 GTRD no Blood (GM12878) 21580963
chr12 125027983 125028608 ZNF274 GTRD no Blood (GM12878) 108068842
chr12 125028191 125028200 VENTX JASPAR yes 124391818
chr12 125028191 125028201 GBX2 JASPAR yes 124391819
chr12 125028191 125028201 HOXB3 JASPAR yes 124391820
chr12 125028191 125028201 MNX1 JASPAR yes 124391821
chr12 125028192 125028200 BARX1 JASPAR yes 124391822
chr12 125028192 125028200 EN1 JASPAR yes 124391823
chr12 125028192 125028200 ISL2 JASPAR yes 124391824
chr12 125028192 125028200 MSX1 JASPAR yes 124391825
chr12 125028192 125028200 MSX2 JASPAR yes 124391826
chr12 125028192 125028200 PDX1 JASPAR yes 124391827
Genes associated with rs186555387[chr12:125028197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More