EnhancerDB
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  3. rs186635246[chr1:55041883]
Enhancers that have rs186635246[chr1:55041883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs186635246[chr1:55041883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55041881 55041894 ZBTB18 JASPAR yes 28994570
chr1 55041882 55041894 PKNOX1 JASPAR yes 28994571
chr1 55041882 55041894 PKNOX2 JASPAR yes 28994572
chr1 55041882 55041894 TGIF1 JASPAR yes 28994573
chr1 55041882 55041894 TGIF2 JASPAR yes 28994574
chr1 55041883 55041892 SNAI2 JASPAR yes 28994575
chr1 55041883 55041893 FIGLA JASPAR yes 28994576
chr1 55041883 55041893 ID4 JASPAR yes 28994577
chr1 55041883 55041893 MSC JASPAR yes 28994578
chr1 55041883 55041893 MYF6 JASPAR yes 28994579
chr1 55041883 55041893 TCF3 JASPAR yes 28994580
chr1 55041883 55041893 TCF4 JASPAR yes 28994581
Genes associated with rs186635246[chr1:55041883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More