EnhancerDB
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  3. rs186809598[chr1:32592216]
Enhancers that have rs186809598[chr1:32592216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 32574975 32601599 enh207
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs186809598[chr1:32592216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 32592201 32592219 RARA JASPAR yes 27979370
chr1 32592205 32592219 NR2F1 JASPAR yes 27979371
chr1 32592205 32592219 RXRB JASPAR yes 27979372
chr1 32592205 32592219 RXRG JASPAR yes 27979373
chr1 32592208 32592221 NR2F1 JASPAR yes 27979374
chr1 32592212 32592220 CREB1 JASPAR yes 27979375
chr1 32592216 32592226 SREBF2 JASPAR yes 27979376
chr1 32592216 32592227 USF1 JASPAR yes 27979377
chr1 32592216 32592227 USF2 JASPAR yes 27979378
Genes associated with rs186809598[chr1:32592216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 32757687 32799236 + HDAC1 ENSG00000116478.7 32757687 165471 Spleen 0.165532 454