EnhancerDB
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  3. rs186820456[chr19:13965509]
Enhancers that have rs186820456[chr19:13965509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs186820456[chr19:13965509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13964390 13966469 AR GTRD no Prostate (PC-3) 21852771
chr19 13965135 13965759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852774
chr19 13965204 13965668 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852775
chr19 13965223 13965741 TCF7L2 GTRD no Colon (HCT116) 21852776
chr19 13965239 13965971 TCF7L2 GTRD no Colon (HCT116) 21852777
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965317 13966059 TCF7L2 GTRD no Colon (HCT116) 21852779
chr19 13965445 13966199 TCF7L2 GTRD no Colon (HCT116) 21852780
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13965461 13965869 TCF7L2 GTRD no Colon (HCT116) 21852782
chr19 13965470 13966728 ZNF143 GTRD no Epithelial (MCF-7) 21852783
chr19 13965491 13965509 MAFF JASPAR yes 112539016
Genes associated with rs186820456[chr19:13965509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More