EnhancerDB
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  3. rs186924346[chr1:234793379]
Enhancers that have rs186924346[chr1:234793379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 234792654 234793437 vista5626
VISTA
Transcript factors that have rs186924346[chr1:234793379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234793146 234793422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395579
chr1 234793146 234793422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881410
chr1 234793379 234793383 LFA1 TRANSFAC yes 36299625
chr1 234793379 234793383 LFA1 TRANSFAC yes 118484316
Genes associated with rs186924346[chr1:234793379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More